Confine your puppy to his, 'puppy-proofed' bathroom or an exercise pen and paper (or wee-wee pad) the entire floor. Put his bed, toys and food/water bowls there. At first there will be no rhyme or reason to where your pup eliminates. He will go every where and any where. He will also probably play with the papers, chew on them, and drag them around his little den. Most puppies do this and you just have to live with it. Don't get upset; just accept it as life with a young puppy. The important thing is that when you get home, clean up the mess and lay down fresh papers.
Prior to the 1980s, Karen Pryor was a marine-mammal trainer who used Skinner's operant principles to teach dolphins and develop marine-mammal shows. In 1984, she published her book, Don't Shoot the Dog: The New Art of Teaching and Training, an explanation of operant-conditioning procedures written for the general public. In the book Pryor explains why punishment as a way to get people to change often fails, and describes specific positive methods for changing the behaviour of husbands, children and pets. Pryor's dog training materials and seminars showed how operant procedures can be used to provide training based on positive reinforcement of good behavior. Pryor and Gary Wilkes introduced clicker training to dog trainers with a series of seminars in 1992 and 1993. Wilkes used aversives as well as rewards, and the philosophical differences soon ended the partnership.